BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032F07SP1|AL429604
(831 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1777 1639 0.0
3x_Contig1186 161 2e-39
>3x_Contig1777
Length = 26319
Score = 1639 bits (825), Expect = 0.0
Identities = 828/831 (99%)
Strand = Plus / Plus
Query: 1 gatccatcagttggcttgtaaaccaattccaacttaccaggacctggaacgacaagatcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15425 gatccatcagttggcttgtaaaccaattccaacttaccaggacctggaacgacaagatcg 15484
Query: 61 gtggccttatattgatcaccatgggcatgtctaccgatgacaataggtttttcccatcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15485 gtggccttatattgatcaccatgggcatgtctaccgatgacaataggtttttcccatcca 15544
Query: 121 ggcactaatcttgggattctaggaatgacaattggttcacggaaaacagtaccaccaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15545 ggcactaatcttgggattctaggaatgacaattggttcacggaaaacagtaccaccaagg 15604
Query: 181 atgtttctgatggtaccatttggtgatttccacatctttttcaaattgaactctttaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15605 atgtttctgatggtaccatttggtgatttccacatctttttcaaattgaactctttaaca 15664
Query: 241 cgaccctcgtccggtgtaatagtggcacatttcacaccaacaccgtatttcttgatggca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15665 cgaccctcgtccggtgtaatagtggcacatttcacaccaacaccgtatttcttgatggca 15724
Query: 301 ttagcagaatccacagtaacttgatcgttagtggcatcacggttcgtcacggaaagatcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15725 ttagcagaatccacagtaacttgatcgttagtggcatcacggttcgtcacggaaagatcg 15784
Query: 361 taatacttcaaatccacatccaaatatggtaagataagtttactcttaatcttatcccag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15785 taatacttcaaatccacatccaaatatggtaagataagtttactcttaatcttatcccag 15844
Query: 421 ataattctagtcatctcatcaccgtccaactccacaacgggagtctgaactttaatcttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15845 ataattctagtcatctcatcaccgtccaactccacaacgggagtctgaactttaatcttg 15904
Query: 481 cgcaacccagttgcagcagagctggaaaactgacgattaatactcatcactgcggccttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15905 cgcaacccagttgcagcagagctggaaaactgacgattaatactcatcactgcggccttc 15964
Query: 541 atagtgtcctgtcctgtcctaattcaatttagctcagtatacaacaaccgtcgaatatac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15965 atagtgtcctgtcctgtcctaattcaatttagctcagtatacaacaaccgtcgaatatac 16024
Query: 601 caaccttaacctgacctaaagttataaggatacagaaactttatagcgcagagacgcaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16025 caaccttaacctgacctaaagttataaggatacagaaactttatagcgcagagacgcaaa 16084
Query: 661 tatacatgcatatatatatrakagacttaacctcatcactaatcacagttaaaagccaaa 720
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 16085 tatacatgcatatatatataatagacttaacctcatcactaatcacagttaaaagccaaa 16144
Query: 721 atatccttctcaaagcagtgatagaaaaataaagcgaatagctataatagaratgataga 780
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 16145 atatccttctcaaagcagtgatagaaaaataaagcgaatagctataatagaaatgataga 16204
Query: 781 agagtcattcatataacttacttagggcaatggcaatcgcagtacttttgt 831
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16205 agagtcattcatataacttacttagggcaatggcaatcgcagtacttttgt 16255
>3x_Contig1186
Length = 4633
Score = 161 bits (81), Expect = 2e-39
Identities = 141/161 (87%)
Strand = Plus / Plus
Query: 131 ttgggattctaggaatgacaattggttcacggaaaacagtaccaccaaggatgtttctga 190
|||| ||||| ||||| ||||||||||||||||| || |||||||| ||||| ||||| |
Sbjct: 3777 ttggaattcttggaatcacaattggttcacggaacacggtaccacctaggatatttctaa 3836
Query: 191 tggtaccatttggtgatttccacatctttttcaaattgaactctttaacacgaccctcgt 250
||||||| ||||| |||||||||||||||||||| ||||| || | |||||| |||| |
Sbjct: 3837 tggtaccgtttggagatttccacatctttttcaatttgaattcctcgacacgagcctcat 3896
Query: 251 ccggtgtaatagtggcacatttcacaccaacaccgtatttc 291
|||||||||| || |||||||||||| ||||||||||||||
Sbjct: 3897 ccggtgtaatcgtagcacatttcacagcaacaccgtatttc 3937
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5455
Number of Sequences: 1807
Number of extensions: 5455
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 2
length of query: 831
length of database: 10,358,551
effective HSP length: 16
effective length of query: 815
effective length of database: 10,329,639
effective search space: 8418655785
effective search space used: 8418655785
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)